STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3456InterPro IPR000498. (210 aa)    
Predicted Functional Partners:
BF49_6099
FIG00440034 hypothetical protein.
  
     0.758
BF49_0113
FIG00442128 hypothetical protein.
  
     0.745
BF49_6908
Invasion protein B involved in pathogenesis.
 
     0.732
BF49_4006
Signal recognition particle GTPase.
 
     0.709
BF49_6539
FIG00441513 hypothetical protein.
  
     0.698
BF49_6061
FIG00450516 Zincfinger domain protein.
  
     0.668
BF49_1264
FIG00442049 hypothetical protein.
  
     0.660
BF49_2910
Bll7395 protein.
  
     0.647
BF49_6501
Possible outer membrane protein possible porin precursor; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
 
 0.647
BF49_3980
FIG00450046 hypothetical protein.
  
     0.645
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.