STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3499Ribokinase EC 27115. (313 aa)    
Predicted Functional Partners:
BF49_1327
Ribokinase EC 27115.
  
     0.759
BF49_1328
Ribokinase EC 27115.
  
     0.739
BF49_3497
HIT1 PROTEIN.
  
   0.731
BF49_3498
NADH pyrophosphatase EC 36122.
   
   0.731
BF49_3201
Superoxide dismutase Fe EC 11511; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
    
 0.657
BF49_3500
Transcriptional regulator AsnC family.
       0.637
tal
Transaldolase EC 2212 Glucose6phosphate isomerase EC 5319; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
  
 
 0.628
hisA
Phosphoribosylformimino5aminoimidazole carboxamide ribotide isomerase EC 53116.
  
    0.602
BF49_3496
Muconate cycloisomerase EC 5511; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
    
 0.532
purA
Adenylosuccinate synthetase EC 6344; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
 
 0.490
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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