Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
BF49_3508FumaratesuccinateLaspartate dehydrogenases. (552 aa)    
Predicted Functional Partners:
BF49_3509
Putative esterase.
 
     0.816
BF49_5845
Fumarate hydratase class I aerobic EC 4212; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
  0.674
BF49_2412
Flavodoxin reductases ferredoxinNADPH reductases family 1 Vanillate Odemethylase oxidoreductase EC 11413.
  
  
 0.598
BF49_1280
Similar to flavohemoprotein.
    
 0.557
BF49_3510
Endoribonuclease LPSP.
       0.515
fumC
Fumarate hydratase class II EC 4212; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
     
  0.464
BF49_2365
Aerobic glycerol3phosphate dehydrogenase EC 1153; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
     
  0.460
BF49_3507
FIG01006414 hypothetical protein.
       0.435
BF49_2414
GbcA Glycine betaine demethylase subunit A.
     
 0.427
BF49_6634
Alphaketoglutaratedependent taurine dioxygenase EC 1141117.
     
 0.427
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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