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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3520Gentisate 12dioxygenase EC 113114. (346 aa)    
Predicted Functional Partners:
BF49_3519
Maleylacetoacetate isomerase EC 5212 Glutathione Stransferase zeta EC 25118.
 
  
 0.978
BF49_3706
Phydroxylaminobenzoate lyase.
  
     0.597
BF49_6060
Salicylate hydroxylase EC 114131.
 
  
 0.586
BF49_4571
Salicylate hydroxylase EC 114131.
 
  
 0.578
BF49_5554
2polyprenyl6methoxyphenol hydroxylase and related FADdependent oxidoreductases.
 
  
 0.570
BF49_2290
Salicylate hydroxylase EC 114131.
 
  
 0.551
BF49_6634
Alphaketoglutaratedependent taurine dioxygenase EC 1141117.
 
   
 0.534
BF49_6584
Salicylate hydroxylase EC 114131.
 
  
 0.527
BF49_4863
Fumarylacetoacetase EC 3712.
    
 0.521
BF49_5712
Fumarylacetoacetate FAA hydrolase EC 41168.
    
 0.521
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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