STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3524ABC transporter substratebinding protein. (334 aa)    
Predicted Functional Partners:
BF49_3521
ABC transporter permease protein with unknown substrate.
 
 0.947
BF49_3522
ABC transporter ATPbinding protein.
 
 0.921
BF49_7267
Alkanesulfonates transport system permease protein.
 
 0.790
BF49_3525
Fumarate reductasesuccinate dehydrogenase flavoproteinlike.
 
    0.722
BF49_5184
Hydroxymethylpyrimidine ABC transporter transmembrane component.
 
 0.722
BF49_5544
ABCtype nitratesulfonatebicarbonate transport system permease component.
 
 0.707
BF49_1494
Alkanesulfonates transport system permease protein.
 
 0.698
BF49_1846
Hydroxymethylpyrimidine ABC transporter transmembrane component.
 
 0.697
BF49_5183
ABCtype nitratesulfonatebicarbonate transport system ATPase component.
 
 0.678
BF49_1844
Hydroxymethylpyrimidine ABC transporter ATPase component.
 
 0.675
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.