STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3529Predicted hydrolase of the alphabetahydrolase fold. (225 aa)    
Predicted Functional Partners:
BF49_5740
Hydroxymethylpyrimidine phosphate kinase ThiD EC 2747.
  
    0.656
BF49_6032
TPR domain protein putative component of TonB system.
    
 0.646
BF49_7061
TPR domain protein putative component of TonB system.
    
 0.646
BF49_7062
TPR domain protein putative component of TonB system.
    
 0.646
BF49_7063
TPR domain protein putative component of TonB system.
    
 0.646
BF49_7064
TPR domain protein putative component of TonB system.
    
 0.646
BF49_3530
ButyrylCoA dehydrogenase EC 13992.
    
 0.576
BF49_4189
Hypothetical protein.
    
  0.566
BF49_6834
Peptidylprolyl cistrans isomerase EC 5218; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.550
BF49_6836
Peptidylprolyl cistrans isomerase EC 5218; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.550
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.