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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3558Bll3470 hypothetical protein. (168 aa)    
Predicted Functional Partners:
BF49_3557
Bll3470 hypothetical protein.
       0.773
BF49_3559
Putative transport protein.
       0.762
BF49_5564
FIG00440890 hypothetical protein.
  
  
 0.601
BF49_1390
Alcohol dehydrogenase EC 1111.
  
 
 0.537
BF49_3560
Protein of unknown function DUF1275.
       0.525
BF49_3561
Blr3473 probable sulfate transporter.
       0.525
BF49_7192
Alcohol dehydrogenase EC 1111.
  
 
 0.477
gcvP
Glycine dehydrogenase decarboxylating glycine cleavage system P protein EC 1442; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
    0.458
BF49_3556
Bll3469 hypothetical protein.
       0.406
BF49_2373
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase; EnoylCoA hydratase EC 42117 3hydroxyacylCoA dehydrogenase EC 11135 3hydroxybutyrylCoA epimerase EC 5123.
   
 
 0.402
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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