STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3566UDPgalactoselipid carrier transferase EC 2. (266 aa)    
Predicted Functional Partners:
ppk
Polyphosphate kinase EC 2741; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
 
  
 0.964
BF49_1870
UDPgalactoselipid carrier transferase EC 2.
  
  
 
0.904
BF49_0941
Exopolyphosphatase EC 36111.
 
 
 0.719
BF49_3567
Inosine5monophosphate dehydrogenase EC 111205.
       0.660
BF49_3351
Outer membrane protein W precursor.
   
    0.601
BF49_1084
Exopolyphosphatase EC 36111.
 
 
 0.594
BF49_4445
Coproporphyrinogen III oxidase oxygenindependent EC 139922; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
    0.591
BF49_5294
FIG00801094 hypothetical protein.
   
    0.570
BF49_1924
Cytochrome c oxidase subunit CcoO EC 1931.
   
    0.545
BF49_0170
Heme chaperone HemW; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
    0.521
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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