STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3573Protein of unknown function DUF882. (304 aa)    
Predicted Functional Partners:
BF49_3572
FIG01200701 possible membrane protein.
 
  
 0.973
BF49_3244
Chemotaxis protein methyltransferase CheR EC 21180.
  
 
 0.934
BF49_2142
Twocomponent hybrid sensor and regulator.
  
 
 0.837
BF49_4794
Flagellar basalbody rod protein FlgC; Belongs to the flagella basal body rod proteins family.
  
 
 0.800
BF49_5827
Flagellar basalbody rod protein FlgC; Belongs to the flagella basal body rod proteins family.
  
 
 0.800
fliE
Flagellar hookbasal body complex protein FliE.
  
 
 0.787
fliE-2
Flagellar hookbasal body complex protein FliE.
  
 
 0.787
BF49_4793
Flagellar basalbody rod protein FlgB.
  
 
 0.778
flgI
Flagellar Pring protein FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
  
 
 0.778
flgH
Flagellar Lring protein FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
  
 
 0.778
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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