STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3608Phage portal protein. (549 aa)    
Predicted Functional Partners:
BF49_3609
Headtail preconnector protein GP5.
 
  
 0.921
BF49_3606
Chemotaxis protein methyltransferase CheR EC 21180.
 
  
 0.872
BF49_3612
Elements of external origin phagerelated functions and prophages.
 
     0.827
BF49_3607
Hypothetical protein.
       0.773
BF49_3610
Hypothetical protein.
  
  
 0.666
clpP
ATPdependent Clp protease proteolytic subunit EC 342192; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
  
 
 0.659
clpP-2
ATPdependent Clp protease proteolytic subunit EC 342192; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
  
 
 0.659
BF49_3611
Hypothetical protein.
  
  
 0.630
BF49_3593
Mlr8507 protein.
 
    0.537
BF49_1849
Possible sugar kinase; Belongs to the carbohydrate kinase PfkB family.
  
     0.400
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.