STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3711Hypothetical protein. (214 aa)    
Predicted Functional Partners:
BF49_3712
Bifunctional protein zinccontaining alcohol dehydrogenase quinone oxidoreductase NADPHquinone reductase EC 111 Similar to arginate lyase.
       0.568
BF49_4031
Epoxide hydrolase EC 3329.
  
     0.478
BF49_3709
Transcriptional regulator containing an amidase domain and an AraCtype DNAbinding HTH domain.
 
     0.465
BF49_2043
Monooxygenase FADbinding.
  
     0.445
murB
UDPNacetylenolpyruvoylglucosamine reductase EC 111158; Cell wall formation.
     
 0.445
BF49_3650
Hypothetical protein.
  
     0.430
BF49_7126
Hypothetical protein.
  
     0.430
pnp
Polyribonucleotide nucleotidyltransferase EC 2778; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
  
 
 0.421
BF49_0746
Nucleosidediphosphatesugar epimerases.
 
     0.414
murD
UDPNacetylmuramoylalanineDglutamate ligase EC 6329; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
    
  0.413
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.