STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3771PASPAC sensor hybrid histidine kinase. (399 aa)    
Predicted Functional Partners:
BF49_6366
Chemotaxis regulator transmits chemoreceptor signals to flagelllar motor components CheY.
   
 0.644
BF49_6780
Sensor histidine kinase with PASPAC and response regulator receiver domains EC 273.
    
 0.627
BF49_1306
Periplasmic sensor signal transduction histidine kinase.
 
      0.586
BF49_2142
Twocomponent hybrid sensor and regulator.
 
   
 0.568
BF49_3772
Hypothetical protein.
       0.566
BF49_6796
Twocomponent response regulator.
 
   
 0.527
BF49_2182
Chemotaxis regulator transmits chemoreceptor signals to flagelllar motor components CheY.
   
 0.523
BF49_0312
Twocomponent response regulator.
 
   
 0.510
BF49_6379
Phytochrome twocomponent sensor histidine kinase EC 273.
  
   
 0.488
BF49_3218
DNAdirected RNA polymerase specialized sigma subunit sigma24like.
 
   
 0.470
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.