Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BF49_3779Cytochrome c553like. (272 aa)    
Predicted Functional Partners:
BF49_2306
Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 0.942
BF49_3783
Putative diheme cytochrome c553.
 
 0.900
BF49_3781
Cytochrome c oxidase BOa3type chain II EC 1931.
 
  
 0.898
BF49_3780
Cytochrome c oxidase BOa3type chain I EC 1931.
 
 
 0.896
BF49_2307
Ubiquinolcytochrome C reductase ironsulfur subunit EC 11022; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 0.839
BF49_3784
Cytochrome c553like.
 
    
0.835
BF49_2050
Molybdopterin oxidoreductase ironsulfur binding subunit EC 127.
   
 
 0.787
BF49_1924
Cytochrome c oxidase subunit CcoO EC 1931.
  
 0.782
BF49_3782
FIG00441469 hypothetical protein.
       0.780
BF49_1925
Cytochrome c oxidase subunit CcoN EC 1931; Belongs to the heme-copper respiratory oxidase family.
  
 0.754
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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