STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3787Cytochrome c2. (129 aa)    
Predicted Functional Partners:
BF49_2306
Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 0.971
BF49_2307
Ubiquinolcytochrome C reductase ironsulfur subunit EC 11022; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 0.955
BF49_5146
Sulfite dehydrogenase cytochrome subunit SoxD.
   
 0.929
BF49_5272
Cytochrome c oxidase polypeptide III EC 1931.
  
 0.916
BF49_5273
Cytochrome c oxidase polypeptide I EC 1931; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
  
 0.916
BF49_2624
Tungstencontaining formate dehydrogenase beta subunit.
   
 0.886
BF49_5508
Membrane ctype cytochrome cy.
   
 0.871
BF49_5349
Ubiquinolcytochrome C reductase ironsulfur subunit EC 11022.
  
 0.827
BF49_2050
Molybdopterin oxidoreductase ironsulfur binding subunit EC 127.
  
 
 0.818
BF49_2057
Cytochrome c oxidase polypeptide II EC 1931.
   
 0.796
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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