Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
BF49_3796Ferredoxin. (291 aa)    
Predicted Functional Partners:
BF49_3794
Nitrous oxide reductase maturation protein NosR.
 
     0.837
BF49_3790
Nitrous oxide reductase maturation transmembrane protein NosY.
 
     0.797
BF49_3789
Nitrous oxide reductase maturation protein outermembrane lipoprotein NosL.
 
     0.779
BF49_3792
Nitrous oxide reductase maturation protein NosD.
 
     0.771
nosZ
Nitrousoxide reductase EC 17996; Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide; Belongs to the NosZ family.
 
     0.766
BF49_3791
Nitrous oxide reductase maturation protein NosF ATPase.
 
     0.677
BF49_3788
Nitrous oxide reductase maturation periplasmic protein NosX; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
 
     0.648
gcvP
Glycine dehydrogenase decarboxylating glycine cleavage system P protein EC 1442; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
  0.524
BF49_4574
MISCELLANEOUS Unknown.
  
     0.501
BF49_3795
Hypothetical protein.
       0.483
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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