STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_379924diketo3deoxyLfuconate hydrolase. (171 aa)    
Predicted Functional Partners:
BF49_4863
Fumarylacetoacetase EC 3712.
  
  
  0.838
hmgA
Homogentisate 12dioxygenase EC 113115; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate.
  
 
 0.667
BF49_1723
5carboxymethyl2hydroxymuconate deltaisomerase EC 53310.
  
 
 0.608
BF49_5712
Fumarylacetoacetate FAA hydrolase EC 41168.
  
  
 
0.513
BF49_1719
24dihydroxyhept2ene17dioic acid aldolase EC 412n4; Belongs to the HpcH/HpaI aldolase family.
  
 
 0.477
BF49_5943
Putative 24dihydroxyhept2ene17dioic acid aldolase; Belongs to the HpcH/HpaI aldolase family.
  
 
 0.477
BF49_3798
Hypothetical protein.
       0.459
BF49_2116
34dihydroxyphenylacetate 23dioxygenase EC 1131115.
  
  
 0.453
leuC
3isopropylmalate dehydratase large subunit EC 42133; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
  
 
  0.448
BF49_3520
Gentisate 12dioxygenase EC 113114.
    
 0.446
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.