Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3835Mobile element protein. (200 aa)    
Predicted Functional Partners:
BF49_0793
Superfamily I DNA and RNA helicases and helicase subunits.
  
    0.836
BF49_1229
DNA and RNA helicase.
  
    0.836
BF49_2462
Alginate biosynthesis protein AlgX.
  
   
 0.687
BF49_2441
Hypothetical protein.
  
     0.525
BF49_3834
Hypothetical protein.
       0.484
BF49_3836
6aminohexanoatedimer hydrolase EC 35146.
       0.467
nadK
NAD kinase EC 27123; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
     
  0.464
BF49_4690
Mobile element protein.
  
   
 0.435
BF49_4691
Putative transposase.
  
   
 0.414
BF49_6344
33hydroxyphenylpropionate hydroxylase EC 11413.
  
     0.414
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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