STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3844Hypothetical protein. (138 aa)    
Predicted Functional Partners:
BF49_3845
Hypothetical protein.
 
    0.955
BF49_4244
FIG00854283 hypothetical protein.
  
  
 0.612
BF49_5568
FIG00443194 hypothetical protein.
  
  
 0.612
BF49_3846
Hypothetical protein.
       0.585
BF49_4897
UPF0229 protein YeaH; Belongs to the UPF0229 family.
   
    0.559
BF49_4240
FIG01004290 hypothetical protein.
  
     0.556
BF49_4898
FIG004684 SpoVRlike protein.
   
    0.535
BF49_6942
Twocomponent response regulator.
  
     0.532
BF49_2404
Porphobilinogen deaminase EC 25161; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
   
    0.530
BF49_6379
Phytochrome twocomponent sensor histidine kinase EC 273.
  
     0.515
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.