STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3853Putative transcriptional regulator CopG family. (139 aa)    
Predicted Functional Partners:
BF49_3852
Poly3hydroxybutyrate depolymerase.
 
     0.860
BF49_3745
Poly3hydroxybutyrate depolymerase.
 
     0.781
BF49_4526
Poly3hydroxybutyrate depolymerase.
 
     0.781
BF49_7287
Poly3hydroxyalkanoate depolymerase EC 311.
 
     0.652
BF49_0599
Hypothetical protein.
   
 
 0.519
BF49_3591
Hypothetical protein.
   
 
 0.519
cobB-2
NADdependent protein deacetylase of SIR2 family; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily.
   
    0.501
cobB-3
NADdependent protein deacetylase of SIR2 family; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.
   
    0.501
BF49_7108
NADdependent protein deacetylase of SIR2 family.
   
    0.501
BF49_3854
Hypothetical protein.
       0.458
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.