STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3857Methyltransferase type 12. (354 aa)    
Predicted Functional Partners:
BF49_3014
PUTATIVE METHYLTRANSFERASE.
 
 
 0.646
BF49_3855
Betaketoadipate enollactone hydrolase EC 31124.
 
  
 0.617
BF49_1435
CobN component of cobalt chelatase involved in B12 biosynthesis.
  
 
 0.556
BF49_0079
Ubiquinone biosynthesis monooxygenase UbiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily.
   
 0.542
BF49_6410
FIG00439628 hypothetical protein.
   
 0.524
BF49_3856
Transcriptional regulator TetR family.
     
 0.480
BF49_6971
Hypothetical protein.
  
 0.478
BF49_2511
dTDP4dehydrorhamnose 35epimerase EC 51313; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
 
 0.461
BF49_2763
Ubiquinonemenaquinone biosynthesis methyltransferase UbiE EC 211.
 
 
 0.454
BF49_1280
Similar to flavohemoprotein.
 
 
 0.436
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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