STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3896Novel Xylose regulator from LacI family. (352 aa)    
Predicted Functional Partners:
BF49_3899
Dxylose transport ATPbinding protein XylG.
 
 0.842
BF49_3900
Xylose ABC transporter permease protein XylH; Belongs to the binding-protein-dependent transport system permease family.
  
 0.794
BF49_2142
Twocomponent hybrid sensor and regulator.
   
 
 0.792
xylA
Xylose isomerase EC 5315; Belongs to the xylose isomerase family.
 
   
 0.787
BF49_3244
Chemotaxis protein methyltransferase CheR EC 21180.
   
 
 0.774
xylB-2
Xylulose kinase EC 27117.
 
  
 0.759
BF49_0769
Twocomponent hybrid sensor and regulator.
   
 
 0.736
BF49_1446
Sensory box histidine kinaseresponse regulator.
   
 
 0.731
BF49_2876
Chemotaxis regulator transmits chemoreceptor signals to flagelllar motor components CheY.
   
 
 0.722
BF49_0183
Twocomponent hybrid sensor and regulator.
   
 
 0.705
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.