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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3903Lfuconolactone hydrolase. (282 aa)    
Predicted Functional Partners:
BF49_3902
Lfucobetapyranose dehydrogenase EC 111122.
 
 0.995
BF49_1311
Lfucobetapyranose dehydrogenase EC 111122.
 
 0.975
BF49_5094
Nitratenitrite transporter.
  
  
 0.811
BF49_2810
4hydroxytetrahydrodipicolinate synthase EC 4337; Belongs to the DapA family.
  
  
 0.776
BF49_6568
4hydroxytetrahydrodipicolinate synthase EC 4337; Belongs to the DapA family.
  
  
 0.776
BF49_3901
ABC transporter sugarbinding protein.
 
     0.646
BF49_2011
Mandelate racemasemuconate lactonizing enzyme family protein.
 
  
 0.630
BF49_2004
Mandelate racemasemuconate lactonizing enzyme family protein.
 
  
 0.599
BF49_3154
Osuccinylbenzoate synthase EC 421113; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
  
 0.511
BF49_1486
Predicted 2keto3deoxyxylonate dehydratase.
 
   
 0.503
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.