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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BF49_3905FerredoxinNADP reductase EC 11812. (257 aa)    
Predicted Functional Partners:
BF49_1800
PhenylacetateCoA oxygenase PaaH subunit.
  
 
 0.622
BF49_2793
Proline dehydrogenase EC 15998 Proline oxidase Delta1pyrroline5carboxylate dehydrogenase EC 15112; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
    
 0.599
BF49_1798
PhenylacetateCoA oxygenase PaaJ subunit.
  
 
 0.516
BF49_1799
PhenylacetateCoA oxygenase PaaI subunit.
  
 0.510
BF49_1801
PhenylacetateCoA oxygenase PaaG subunit.
  
 0.501
BF49_2267
Electron transfer flavoproteinubiquinone oxidoreductase EC 1551; Accepts electrons from ETF and reduces ubiquinone.
 
   
 0.499
BF49_4342
Opine oxidase subunit A.
  
 
 0.491
BF49_5553
AnthraniloylCoA monooxygenase EC 1141340.
    
 0.475
BF49_6971
Hypothetical protein.
     
 0.475
BF49_3906
Ferredoxindependent glutamate synthase EC 1471; Belongs to the glutamate synthase family.
     
 0.439
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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