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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3906Ferredoxindependent glutamate synthase EC 1471; Belongs to the glutamate synthase family. (566 aa)    
Predicted Functional Partners:
BF49_3172
Glutamate synthase NADPH small chain EC 14113.
 0.994
BF49_3171
Glutamate synthase NADPH large chain EC 14113.
 
0.979
BF49_4910
Glutamate synthase NADPH small chain EC 14113.
  
 0.961
guaA
GMP synthase glutaminehydrolyzing EC 6352; Catalyzes the synthesis of GMP from XMP.
  
 
 0.762
BF49_0889
Glutamine synthetase type II eukaryotic EC 6312.
  
 
 0.658
BF49_6608
Glutamine synthetase type I EC 6312.
  
 
 0.654
BF49_1708
Ferredoxin reductase.
  
 
 0.633
BF49_2830
Biotin carboxylase EC 63414.
  
 
 0.619
carB
Carbamoylphosphate synthase large chain EC 6355; Belongs to the CarB family.
  
 
 0.614
glsA
Glutaminase EC 3512; Belongs to the glutaminase family.
    
 0.586
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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