STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3907Bsl0098 protein. (80 aa)    
Predicted Functional Partners:
BF49_6085
FIG00983977 hypothetical protein.
  
     0.736
BF49_1646
Bll3046 protein.
  
     0.723
BF49_5803
FIG00443056 hypothetical protein.
  
     0.711
BF49_0652
FIG01007117 hypothetical protein.
  
     0.710
BF49_4214
Type IV prepilin peptidase TadVCpaA.
  
   
 0.685
BF49_4218
Similar to secretin RcpACpaC associated with Flp pilus assembly.
  
     0.667
BF49_4210
Type IIIV secretion system ATPase TadZCpaE associated with Flp pilus assembly.
  
    0.666
BF49_1383
Hypothetical protein.
  
     0.650
BF49_4206
Flp pilus assembly protein TadD contains TPR repeat.
 
 
 
 0.648
BF49_5572
FIG00441238 hypothetical protein.
  
     0.644
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.