Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
BF49_3916Hydroxymethylpyrimidine ABC transporter transmembrane component. (272 aa)    
Predicted Functional Partners:
BF49_3914
Hydroxymethylpyrimidine ABC transporter substratebinding component.
 
 0.984
BF49_3915
ABCtype nitratesulfonatebicarbonate transport system ATPase component.
 
 0.978
BF49_1844
Hydroxymethylpyrimidine ABC transporter ATPase component.
 
 0.853
BF49_3917
D3phosphoglycerate dehydrogenase EC 11195; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.853
BF49_3918
FIG00440031 hypothetical protein.
       0.853
BF49_1845
Hydroxymethylpyrimidine ABC transporter substratebinding component.
 
 0.849
BF49_0842
Hydroxymethylpyrimidine ABC transporter substratebinding component.
 
 0.838
BF49_0848
Hydroxymethylpyrimidine ABC transporter ATPase component.
 
 0.829
BF49_5838
ABC transporter substratebinding protein.
 
 0.825
BF49_5329
ABC transporter ATPbinding protein with unknown substrate.
 
 0.824
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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