Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3990Putative transmembrane protein. (256 aa)    
Predicted Functional Partners:
BF49_3991
Membrane protein putative.
 
     0.964
BF49_0025
Universal stress protein UspA and related nucleotidebinding proteins.
 
     0.798
BF49_7350
Universal stress protein UspA and related nucleotidebinding proteins.
 
     0.798
BF49_0607
ABCtype cobalaminFe3siderophores transport systems ATPase components.
  
     0.670
BF49_2976
FIG018229 hypothetical protein.
  
     0.566
BF49_3992
TPR repeat SEL1 subfamily.
       0.565
BF49_5153
FIG00441651 hypothetical protein.
  
     0.558
BF49_3320
Periplasmic thioldisulfide oxidoreductase DsbB required for DsbA reoxidation.
  
     0.521
BF49_6982
FIG040666 hypothetical protein perhaps implicated in de Novo purine biosynthesis.
  
     0.515
BF49_5918
FIG040666 hypothetical protein perhaps implicated in de Novo purine biosynthesis.
  
     0.502
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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