STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4000FIG045343 Transcriptional regulator MarR family. (148 aa)    
Predicted Functional Partners:
BF49_6312
FIG00446684 hypothetical protein.
  
     0.605
BF49_4001
Glutamatecysteine ligase EC 6322; Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). Belongs to the glutamate--cysteine ligase type 2 family. EgtA subfamily.
     
 0.577
BF49_3999
Hypothetical protein.
       0.572
BF49_5941
FIG00446651 hypothetical protein.
  
     0.555
BF49_2762
FIG00441270 hypothetical protein.
  
     0.552
BF49_2981
FIG00441988 hypothetical protein.
  
     0.543
BF49_3228
Transcriptional regulator TetR family.
  
     0.505
BF49_4370
Hypothetical protein.
  
     0.484
BF49_5181
Lproline glycine betaine binding ABC transporter protein ProX TC 3A1121 Osmotic adaptation.
  
  
 0.484
BF49_0994
FIG00440764 hypothetical protein.
  
     0.470
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.