Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BF49_4013Conserved hypothetical protein in cyt c oxidase gene clusters. (133 aa)    
Predicted Functional Partners:
BF49_4014
Cytochrome oxidase biogenesis protein Surf1 facilitates heme A insertion.
 
     0.851
BF49_4012
Cytochrome c oxidase polypeptide III EC 1931.
 
     0.794
ctaG
Cytochrome oxidase biogenesis protein Cox11CtaG copper delivery to Cox1; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family.
 
     0.778
BF49_0153
FIG00440777 hypothetical protein.
  
     0.732
BF49_6656
FIG00439560 hypothetical protein.
  
     0.622
BF49_7283
FIG00441575 hypothetical protein.
  
   
 0.622
BF49_4506
FIG00480737 hypothetical protein.
  
     0.616
BF49_3393
FIG01005162 hypothetical protein; Belongs to the UPF0262 family.
 
   
 0.579
ctaB
Cytochrome c oxidase polypeptide I EC 1931; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
     0.555
BF49_4010
CoxF protein.
 
     0.552
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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