STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4047Adenylate cyclase EC 4611. (493 aa)    
Predicted Functional Partners:
BF49_4700
Adenylate cyclase EC 4611.
 
 
 
0.843
rpoB
DNAdirected RNA polymerase beta subunit EC 2776; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.818
BF49_5893
DNAdirected RNA polymerase alpha subunit EC 2776.
    
 0.791
BF49_5901
DNAdirected RNA polymerase alpha subunit EC 2776.
    
 0.791
rpoA
DNAdirected RNA polymerase alpha subunit EC 2776; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.791
BF49_3015
Adenylate cyclase EC 4611.
  
 
 0.781
BF49_4189
Hypothetical protein.
 
 0.755
BF49_2491
TPR domain protein putative component of TonB system.
  
 0.752
BF49_0750
Bll4295 protein.
 
 
 
 0.749
BF49_3754
Adenylate cyclase EC 4611.
 
     0.746
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.