Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BF49_4049PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN. (261 aa)    
Predicted Functional Partners:
BF49_5906
FIG00446791 hypothetical protein.
  
  
 
0.905
BF49_4145
EnoylCoA hydratase EC 42117.
     
  0.900
BF49_2230
Thiosulfate sulfurtransferase rhodanese EC 2811.
    
  0.806
BF49_4190
5methyltetrahydrofolatehomocysteine methyltransferase EC 21113; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.806
BF49_4955
Thiosulfate sulfurtransferase rhodanese EC 2811.
    
  0.806
BF49_5911
Thiosulfate sulfurtransferase rhodanese EC 2811.
    
  0.806
BF49_5736
Cystathionine gammasynthase EC 25148.
     
 0.805
BF49_0538
Oacetylhomoserine sulfhydrylase EC 25149.
     
  0.800
BF49_3417
Oacetylhomoserine sulfhydrylase EC 25149.
     
  0.800
ahcY
Adenosylhomocysteinase EC 3311; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
     
  0.800
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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