STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4066LongchainfattyacidCoA ligase EC 6213. (612 aa)    
Predicted Functional Partners:
BF49_5854
TolA protein.
    
 0.789
BF49_4173
LongchainfattyacidCoA ligase EC 6213.
 
 
0.741
BF49_1742
LongchainfattyacidCoA ligase EC 6213.
 
 
0.739
BF49_3295
LongchainfattyacidCoA ligase EC 6213.
 
 
0.739
BF49_4189
Hypothetical protein.
   
 0.723
BF49_7193
LongchainfattyacidCoA ligase EC 6213.
 
 
0.722
BF49_3344
AcetoacetylCoA synthetase leucine EC 62116.
 
 
0.713
BF49_6971
Hypothetical protein.
  
 0.711
BF49_5680
Phenylacetatecoenzyme A ligase EC 62130.
 
    0.684
BF49_4064
Branchedchain amino acid transport ATPbinding protein LivG TC 3A141.
 
    0.683
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.