STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4080FIG00444212 hypothetical protein. (65 aa)    
Predicted Functional Partners:
BF49_4079
Oligopeptide transport ATPbinding protein OppF TC 3A151; Belongs to the ABC transporter superfamily.
       0.799
BF49_4078
Dipeptide transport system permease protein dppC.
       0.796
BF49_4082
Oligopeptide transport system permease protein OppB TC 3A151; Belongs to the ABC transporter superfamily.
       0.756
BF49_4081
AspartyltRNAAsn amidotransferase subunit A EC 6356 GlutamyltRNAGln amidotransferase subunit A EC 6357; Belongs to the amidase family.
       0.750
BF49_4083
FIG00441398 hypothetical protein.
       0.497
BF49_4077
Dipeptide transport system permease protein DppB TC 3A152.
       0.495
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.