STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4083FIG00441398 hypothetical protein. (89 aa)    
Predicted Functional Partners:
BF49_5933
Dimethylhistidine Nmethyltransferase.
   
    0.567
BF49_4081
AspartyltRNAAsn amidotransferase subunit A EC 6356 GlutamyltRNAGln amidotransferase subunit A EC 6357; Belongs to the amidase family.
       0.528
BF49_4082
Oligopeptide transport system permease protein OppB TC 3A151; Belongs to the ABC transporter superfamily.
       0.528
BF49_4078
Dipeptide transport system permease protein dppC.
       0.497
BF49_4079
Oligopeptide transport ATPbinding protein OppF TC 3A151; Belongs to the ABC transporter superfamily.
       0.497
BF49_4080
FIG00444212 hypothetical protein.
       0.497
BF49_4084
ABC transporter HlyBMsbA family.
       0.418
BF49_4085
HlyD family secretion protein.
       0.418
BF49_0723
Response regulator of the LytRAlgR family.
   
    0.416
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.