STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4084ABC transporter HlyBMsbA family. (581 aa)    
Predicted Functional Partners:
BF49_4085
HlyD family secretion protein.
  
 0.965
BF49_0957
HlyD family secretion protein.
  
 0.699
BF49_5639
Alkaline phosphatase EC 3131.
 
 
 0.606
BF49_0959
Alkaline phosphatase EC 3131.
 
 
 0.480
amn
AMP nucleosidase EC 3224; Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations.
       0.460
BF49_7065
ABC transporter ATPbinding protein.
 
     
0.459
BF49_5954
Alkaline phosphatase EC 3131.
 
 
 0.451
BF49_4083
FIG00441398 hypothetical protein.
       0.419
BF49_4197
ABC transporter periplasmic substratebinding protein.
     
 0.418
BF49_4198
Oligopeptide ABC transporter periplasmic oligopeptidebinding protein OppA TC 3A151.
     
 0.418
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.