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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4085HlyD family secretion protein. (444 aa)    
Predicted Functional Partners:
BF49_4084
ABC transporter HlyBMsbA family.
  
 0.965
BF49_0958
Cyclolysin secretion ATPbinding protein.
 0.910
BF49_6323
Macrolide export ATPbindingpermease protein MacB EC 363.
  
 
 0.761
BF49_1658
Type I secretion outer membrane protein TolC precursor.
  
 0.687
BF49_7038
Type I secretion outer membrane protein TolC precursor.
  
 0.687
BF49_4578
Heavy metal RND efflux outer membrane protein CzcC family.
  
 0.644
BF49_6626
Heavy metal RND efflux outer membrane protein CzcC family.
  
 0.644
BF49_7058
RND efflux system outer membrane lipoprotein NodT family.
  
 0.644
BF49_4007
Cytochrome c oxidase polypeptide II EC 1931; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
    
 0.610
BF49_2718
Cobaltzinccadmium resistance protein CzcA Cation efflux system protein CusA.
  
 0.605
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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