STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4102HMPPP hydrolase pyridoxal phosphatase Cof detected in genetic screen for thiamin metabolic genes PMID15292217. (383 aa)    
Predicted Functional Partners:
BF49_6971
Hypothetical protein.
  
 0.830
BF49_2686
Osuccinylbenzoic acidCoA ligase EC 62126.
   
 0.719
BF49_4103
Betalactamaselike.
  
    0.703
BF49_4104
Glutathione Stransferase family protein.
     
 0.675
BF49_1975
Carboxymuconolactone decarboxylase.
 
 
  0.644
BF49_6553
Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 0.642
BF49_1974
Hypothetical protein.
  
  0.621
BF49_5213
Hypothetical protein in cluster with At3g50560like gene family.
  
     0.608
BF49_4101
Hypothetical transmembrane ironregulated protein.
     
 0.601
BF49_3298
Flavincontaining monooxygenase.
 
 0.600
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.