Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4120Bll7875 hypothetical protein. (162 aa)    
Predicted Functional Partners:
BF49_0275
FIG006581 hypothetical protein.
  
     0.688
BF49_1618
FIG00442417 hypothetical protein.
  
     0.651
BF49_3477
Hypothetical protein.
  
     0.642
BF49_2099
FIG00440914 hypothetical protein.
  
     0.641
BF49_4119
Bll4819 hypothetical protein.
       0.636
BF49_6012
FIG00440991 hypothetical protein.
  
     0.622
BF49_0851
Hypothetical protein.
  
     0.612
BF49_4134
Blr7855 hypothetical protein.
  
     0.608
BF49_1288
FIG00441898 hypothetical protein.
  
     0.596
BF49_1623
Basic prolinerich protein precursor.
  
     0.571
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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