STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4143Shortchain dehydrogenasereductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (253 aa)    
Predicted Functional Partners:
BF49_4145
EnoylCoA hydratase EC 42117.
   
  0.856
BF49_4142
4hydroxybenzoylCoA thioesterase family active site.
   
 
 0.801
BF49_4144
TransferuloylCoA synthase EC 62134.
 
  0.793
BF49_0553
AcetylCoA acetyltransferase EC 2319; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.744
BF49_1103
3ketoacylCoA thiolase EC 23116 AcetylCoA acetyltransferase EC 2319; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.744
BF49_3229
3ketoacylCoA thiolase EC 23116 AcetylCoA acetyltransferase EC 2319; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.744
BF49_3996
3ketoacylCoA thiolase EC 23116 AcetylCoA acetyltransferase EC 2319; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.744
BF49_5415
3ketoacylCoA thiolase EC 23116 AcetylCoA acetyltransferase EC 2319; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.744
BF49_1131
3ketoacylCoA thiolase EC 23116; Belongs to the thiolase-like superfamily. Thiolase family.
  
  0.743
BF49_1756
COGs COG0183.
  
  0.743
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.