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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4148FIG00442538 hypothetical protein; Belongs to the UPF0311 family. (153 aa)    
Predicted Functional Partners:
BF49_4150
TRAP dicarboxylate transporter DctQ subunit unknown substrate 3.
 
     0.832
BF49_4149
TRAP dicarboxylate transporter DctM subunit unknown substrate 3.
   
   0.802
BF49_3084
InterPro IPR006992 COGs COG2159.
 
  
 0.699
BF49_4144
TransferuloylCoA synthase EC 62134.
 
  
  0.622
BF49_4151
TRAP transporter solute receptor unknown substrate 3.
 
     0.619
BF49_3225
TransferuloylCoA synthase EC 62134.
  
  
  0.589
BF49_4153
Phydroxybenzoate hydroxylase EC 114132.
 
     0.556
BF49_2412
Flavodoxin reductases ferredoxinNADPH reductases family 1 Vanillate Odemethylase oxidoreductase EC 11413.
  
  
 0.546
BF49_5201
Cyclohexanone monooxygenase EC 1141322.
 
 0.516
BF49_4496
Putative cytochrome P450 hydroxylase.
  
 0.493
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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