STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4150TRAP dicarboxylate transporter DctQ subunit unknown substrate 3. (169 aa)    
Predicted Functional Partners:
BF49_4149
TRAP dicarboxylate transporter DctM subunit unknown substrate 3.
 
 0.993
BF49_4151
TRAP transporter solute receptor unknown substrate 3.
 
 
 0.991
BF49_4148
FIG00442538 hypothetical protein; Belongs to the UPF0311 family.
 
     0.861
BF49_3683
TRAP dicarboxylate transporter DctM subunit unknown substrate 4.
 
 0.717
BF49_7093
TRAP dicarboxylate transporter DctM subunit unknown substrate 4.
 
 0.717
BF49_2408
Protein involved in metapathway of phenol degradation.
  
     0.686
BF49_4354
TRAP dicarboxylate transporter DctM subunit unknown substrate 5.
  
 0.680
BF49_6994
TRAP dicarboxylate transporter DctM subunit unknown substrate 5.
  
 0.680
BF49_0884
Blr6985 hypothetical protein.
  
     0.641
BF49_3685
TRAP transporter solute receptor unknown substrate 4.
 
 
 0.638
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.