STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4153Phydroxybenzoate hydroxylase EC 114132. (389 aa)    
Predicted Functional Partners:
BF49_2610
Protocatechuate 34dioxygenase alpha chain EC 113113.
 
  
 0.984
BF49_2611
Protocatechuate 34dioxygenase beta chain EC 113113.
 
  
 0.984
BF49_7258
Protocatechuate 34dioxygenase alpha chain EC 113113.
 
  
 0.984
BF49_7259
Protocatechuate 34dioxygenase beta chain EC 113113.
 
  
 0.984
BF49_4142
4hydroxybenzoylCoA thioesterase family active site.
  
  
  0.949
BF49_2608
Phydroxybenzoate hydroxylase EC 114132.
  
  
 
0.902
BF49_5980
Betaketoadipate enollactone hydrolase EC 31124.
 
   
 0.803
BF49_2609
Transcriptional regulator PobR AraC family.
 
   
 0.601
BF49_7260
Catechol 12dioxygenase EC 113111.
 
  
 0.599
BF49_3084
InterPro IPR006992 COGs COG2159.
 
  
 0.586
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.