Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4154FIG00440809 hypothetical protein. (139 aa)    
Predicted Functional Partners:
BF49_1748
FIG00440295 hypothetical protein.
  
     0.746
BF49_5925
14dihydroxy2naphthoylCoA hydrolase EC 31228 in phylloquinone biosynthesis.
  
     0.709
BF49_1848
FIG00442018 hypothetical protein.
  
    0.593
BF49_0985
Fatty acid desaturase family protein.
  
    0.566
BF49_0010
Hypothetical protein.
 
     0.556
BF49_7335
Bll0819 protein.
 
     0.556
BF49_3310
FIG01004869 hypothetical protein.
 
     0.524
BF49_6553
Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.498
BF49_6546
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
    
 0.496
BF49_4153
Phydroxybenzoate hydroxylase EC 114132.
   
 
 0.472
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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