Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BF49_4164FIG00443573 hypothetical protein. (391 aa)    
Predicted Functional Partners:
BF49_4167
Highaffinity branchedchain amino acid transport system permease protein LivH TC 3A141; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.946
BF49_4166
Branchedchain amino acid transport system permease protein LivM TC 3A141; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.940
BF49_4169
Branchedchain amino acid transport ATPbinding protein LivG TC 3A141.
 
 
 0.804
BF49_4776
Highaffinity branchedchain amino acid transport system permease protein LivH TC 3A141 Branchedchain amino acid transport system permease protein LivM TC 3A141; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.776
BF49_4063
Branchedchain amino acid transport system permease protein LivM TC 3A141; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.749
BF49_1219
Branchedchain amino acid transport system permease protein LivM TC 3A141; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.741
BF49_2026
ABC transporter ATPbinding protein; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.741
BF49_4158
ABCtype branchedchain amino acid transport systems ATPase component; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.741
BF49_4163
FIG00439467 hypothetical protein.
 
  
 
0.728
BF49_4159
Highaffinity branchedchain amino acid transport system permease protein LivH TC 3A141; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.698
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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