Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4167Highaffinity branchedchain amino acid transport system permease protein LivH TC 3A141; Belongs to the binding-protein-dependent transport system permease family. (292 aa)    
Predicted Functional Partners:
BF49_4166
Branchedchain amino acid transport system permease protein LivM TC 3A141; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.998
BF49_4163
FIG00439467 hypothetical protein.
 
 
 0.985
BF49_4169
Branchedchain amino acid transport ATPbinding protein LivG TC 3A141.
 
 
 0.983
BF49_4158
ABCtype branchedchain amino acid transport systems ATPase component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.981
BF49_4165
FIG00444214 hypothetical protein.
 
 
 0.972
BF49_4168
Branchedchain amino acid transport ATPbinding protein LivF TC 3A141.
 
 
 0.966
BF49_4164
FIG00443573 hypothetical protein.
 
 
 0.946
BF49_4141
Leucine isoleucine valine threonine and alaninebinding protein.
 
 
 0.940
BF49_4063
Branchedchain amino acid transport system permease protein LivM TC 3A141; Belongs to the binding-protein-dependent transport system permease family.
 
 0.933
BF49_5221
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.933
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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