Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4173LongchainfattyacidCoA ligase EC 6213. (564 aa)    
Predicted Functional Partners:
BF49_6971
Hypothetical protein.
  
 0.937
BF49_4171
3-hydroxyacyl-CoA dehydrogenase; EnoylCoA hydratase EC 42117 Delta3cisdelta2transenoylCoA isomerase EC 5338 3hydroxyacylCoA dehydrogenase EC 11135; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.911
BF49_6553
Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
 
0.866
BF49_4174
3ketoacylCoA thiolase EC 23116 AcetylCoA acetyltransferase EC 2319; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.819
BF49_2686
Osuccinylbenzoic acidCoA ligase EC 62126.
 
0.783
BF49_4172
Hypothetical protein.
       0.773
BF49_4066
LongchainfattyacidCoA ligase EC 6213.
 
 
0.741
BF49_5686
LongchainfattyacidCoA ligase EC 6213.
 
 
0.715
BF49_1742
LongchainfattyacidCoA ligase EC 6213.
  
  
 
0.707
BF49_7193
LongchainfattyacidCoA ligase EC 6213.
  
  
 
0.707
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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