STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4189Hypothetical protein. (335 aa)    
Predicted Functional Partners:
BF49_0605
Hypothetical protein.
   
 0.935
BF49_0782
Endonuclease.
  
 0.927
BF49_1638
Bll3052 protein.
  
 0.890
BF49_5969
Bll5679 protein.
  
 0.888
BF49_6971
Hypothetical protein.
  
 0.879
BF49_3193
Highaffnity carbon uptake protein HatHatR.
   
 0.869
BF49_5306
TPR repeat.
  
 0.866
BF49_1165
Adenylate cyclase EC 4611.
  
 0.859
BF49_3165
Adenylate cyclase EC 4611.
  
 0.859
BF49_2686
Osuccinylbenzoic acidCoA ligase EC 62126.
 
 0.845
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.