Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BF49_4265Dbetahydroxybutyrate dehydrogenase EC 11130. (262 aa)    
Predicted Functional Partners:
BF49_0146
HydroxymethylglutarylCoA lyase EC 4134; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 
 0.926
BF49_6856
AcetoacetylCoA synthetase EC 62116.
    
 0.926
BF49_6296
Bll5333 protein.
 
  0.923
BF49_4440
SuccinylCoA3ketoacidcoenzyme A transferase subunit A EC 2835.
 
 
 0.922
BF49_3682
HydroxymethylglutarylCoA lyase EC 4134.
   
 
 0.916
BF49_3550
3oxoadipate CoAtransferase subunit B EC 2836.
  
 0.914
BF49_4441
SuccinylCoA3ketoacidcoenzyme A transferase subunit B EC 2835.
  
 0.914
BF49_5250
3oxoadipate CoAtransferase subunit B EC 2836.
  
 0.914
BF49_3551
3oxoadipate CoAtransferase subunit A EC 2836.
  
 
 0.911
BF49_5251
3oxoadipate CoAtransferase subunit A EC 2836.
  
 
 0.911
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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