Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BF49_4268THIOdisulfide Interchange Protein. (279 aa)    
Predicted Functional Partners:
BF49_4269
UPF0301 protein YqgE; Belongs to the UPF0301 (AlgH) family.
 
     0.677
atpF
ATP synthase F0 sector subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
     0.652
BF49_0112
Small heat shock protein; Belongs to the small heat shock protein (HSP20) family.
  
     0.639
BF49_2981
FIG00441988 hypothetical protein.
  
     0.621
BF49_6312
FIG00446684 hypothetical protein.
  
     0.621
BF49_2293
Znribboncontaining possibly RNAbinding protein and truncated derivatives.
  
     0.619
BF49_1617
FIG00442207 hypothetical protein.
  
     0.607
BF49_0559
FIG00853143 hypothetical protein.
  
     0.585
BF49_2299
FIG00887518 hypothetical protein.
  
     0.565
BF49_0558
SAMdependent methyltransferase 2 in cluster with Hydroxyacylglutathione hydrolase EC 3126.
  
     0.560
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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