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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_4293RND efflux system inner membrane transporter CmeB. (1052 aa)    
Predicted Functional Partners:
BF49_4292
RND efflux system membrane fusion protein CmeA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.998
BF49_7058
RND efflux system outer membrane lipoprotein NodT family.
 0.954
BF49_1658
Type I secretion outer membrane protein TolC precursor.
  
 0.942
BF49_7038
Type I secretion outer membrane protein TolC precursor.
  
 0.942
BF49_4930
Putative multidrag resistance protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.865
BF49_1171
RND efflux system membrane fusion protein CmeA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.864
BF49_7191
Probable CoZnCd efflux system membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.857
BF49_1152
Macrolidespecific efflux protein MacA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.848
BF49_7057
Probable CoZnCd efflux system membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.848
BF49_0532
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.731
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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